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Jonathan Wren to Animals

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This is a "connection" page, showing publications Jonathan Wren has written about Animals.
Jonathan Wren
Connection Strength
1.248
Animals
  1. DeepGO: predicting protein functions from sequence and interactions using a deep ontology-aware classifier. Bioinformatics. 2018 02 15; 34(4):660-668.
    View in: PubMed
    Score: 0.057
  2. xMWAS: a data-driven integration and differential network analysis tool. Bioinformatics. 2018 02 15; 34(4):701-702.
    View in: PubMed
    Score: 0.057
  3. ROSC-Pred: web-service for rodent organ-specific carcinogenicity prediction. Bioinformatics. 2018 02 15; 34(4):710-712.
    View in: PubMed
    Score: 0.057
  4. ViewBS: a powerful toolkit for visualization of high-throughput bisulfite sequencing data. Bioinformatics. 2018 02 15; 34(4):708-709.
    View in: PubMed
    Score: 0.057
  5. ALE: automated label extraction from GEO metadata. BMC Bioinformatics. 2017 12 28; 18(Suppl 14):509.
    View in: PubMed
    Score: 0.057
  6. ELTD1, a potential new biomarker for gliomas. Neurosurgery. 2013 Jan; 72(1):77-90; discussion 91.
    View in: PubMed
    Score: 0.040
  7. Plant virus biodiversity and ecology. PLoS Biol. 2006 Mar; 4(3):e80.
    View in: PubMed
    Score: 0.025
  8. Tetraspanin Tspan8 restrains interferon signaling to stabilize intestinal epithelium by directing endocytosis of interferon receptor. Cell Mol Life Sci. 2023 May 19; 80(6):154.
    View in: PubMed
    Score: 0.021
  9. The Isolation and In Vitro Differentiation of Primary Fetal Baboon Tracheal Epithelial Cells for the Study of SARS-CoV-2 Host-Virus Interactions. Viruses. 2023 03 28; 15(4).
    View in: PubMed
    Score: 0.020
  10. EWI2 and its relatives in Tetraspanin-enriched membrane domains regulate malignancy. Oncogene. 2023 03; 42(12):861-868.
    View in: PubMed
    Score: 0.020
  11. Developing immortal cell lines from Xenopus embryos, four novel cell lines derived from Xenopus tropicalis. Open Biol. 2022 07; 12(7):220089.
    View in: PubMed
    Score: 0.019
  12. Old blood from heterochronic parabionts accelerates vascular aging in young mice: transcriptomic signature of pathologic smooth muscle remodeling. Geroscience. 2022 04; 44(2):953-981.
    View in: PubMed
    Score: 0.019
  13. A Comprehensive Immune Cell Atlas of Cystic Kidney Disease Reveals the Involvement of Adaptive Immune Cells in Injury-Mediated Cyst Progression in Mice. J Am Soc Nephrol. 2022 04; 33(4):747-768.
    View in: PubMed
    Score: 0.019
  14. Pharmacologic treatment with OKN-007 reduces alpha-motor neuron loss in spinal cord of aging mice. Geroscience. 2022 02; 44(1):67-81.
    View in: PubMed
    Score: 0.019
  15. Oklahoma Nathan Shock Aging Center - assessing the basic biology of aging from genetics to protein and function. Geroscience. 2021 10; 43(5):2183-2203.
    View in: PubMed
    Score: 0.018
  16. Insulin/IGF-1 signaling and heat stress differentially regulate HSF1 activities in germline development. Cell Rep. 2021 08 31; 36(9):109623.
    View in: PubMed
    Score: 0.018
  17. Biallelic variants in KARS1 are associated with neurodevelopmental disorders and hearing loss recapitulated by the knockout zebrafish. Genet Med. 2021 10; 23(10):1933-1943.
    View in: PubMed
    Score: 0.018
  18. Calorie restriction prevents age-related changes in the intestinal microbiota. Aging (Albany NY). 2021 03 10; 13(5):6298-6329.
    View in: PubMed
    Score: 0.018
  19. Restoration of Sarcoplasmic Reticulum Ca2+ ATPase (SERCA) Activity Prevents Age-Related Muscle Atrophy and Weakness in Mice. Int J Mol Sci. 2020 Dec 22; 22(1).
    View in: PubMed
    Score: 0.017
  20. Augmenting E Protein Activity Impairs cDC2 Differentiation at the Pre-cDC Stage. Front Immunol. 2020; 11:577718.
    View in: PubMed
    Score: 0.017
  21. Neuroretinal-Derived Caveolin-1 Promotes Endotoxin-Induced Inflammation in the Murine Retina. Invest Ophthalmol Vis Sci. 2020 10 01; 61(12):19.
    View in: PubMed
    Score: 0.017
  22. E proteins orchestrate dynamic transcriptional cascades implicated in the suppression of the differentiation of group 2 innate lymphoid cells. J Biol Chem. 2020 10 30; 295(44):14866-14877.
    View in: PubMed
    Score: 0.017
  23. Targeting cPLA2 derived lipid hydroperoxides as a potential intervention for sarcopenia. Sci Rep. 2020 08 18; 10(1):13968.
    View in: PubMed
    Score: 0.017
  24. Sex differences in changes of protein synthesis with rapamycin treatment are minimized when metformin is added to rapamycin. Geroscience. 2021 04; 43(2):809-828.
    View in: PubMed
    Score: 0.017
  25. Molecular changes in transcription and metabolic pathways underlying muscle atrophy in the CuZnSOD null mouse model of sarcopenia. Geroscience. 2020 08; 42(4):1101-1118.
    View in: PubMed
    Score: 0.017
  26. Fibroblast-specific Stat1 deletion enhances the myofibroblast phenotype during tissue repair. Wound Repair Regen. 2020 07; 28(4):448-459.
    View in: PubMed
    Score: 0.017
  27. Circulating anti-geronic factors from heterochonic parabionts promote vascular rejuvenation in aged mice: transcriptional footprint of mitochondrial protection, attenuation of oxidative stress, and rescue of endothelial function by young blood. Geroscience. 2020 04; 42(2):727-748.
    View in: PubMed
    Score: 0.016
  28. Nicotinamide mononucleotide (NMN) supplementation promotes neurovascular rejuvenation in aged mice: transcriptional footprint of SIRT1 activation, mitochondrial protection, anti-inflammatory, and anti-apoptotic effects. Geroscience. 2020 04; 42(2):527-546.
    View in: PubMed
    Score: 0.016
  29. Optimized monoclonal antibody treatment against ELTD1 for GBM in a G55 xenograft mouse model. J Cell Mol Med. 2020 01; 24(2):1738-1749.
    View in: PubMed
    Score: 0.016
  30. Nicotinamide mononucleotide (NMN) supplementation promotes anti-aging miRNA expression profile in the aorta of aged mice, predicting epigenetic rejuvenation and anti-atherogenic effects. Geroscience. 2019 08; 41(4):419-439.
    View in: PubMed
    Score: 0.016
  31. Suppression of ILC2 differentiation from committed T cell precursors by E protein transcription factors. J Exp Med. 2019 04 01; 216(4):884-899.
    View in: PubMed
    Score: 0.015
  32. Obesity in Aging Exacerbates Neuroinflammation, Dysregulating Synaptic Function-Related Genes and Altering Eicosanoid Synthesis in the Mouse Hippocampus: Potential Role in Impaired Synaptic Plasticity and Cognitive Decline. J Gerontol A Biol Sci Med Sci. 2019 02 15; 74(3):290-298.
    View in: PubMed
    Score: 0.015
  33. The role of DNA methylation in epigenetics of aging. Pharmacol Ther. 2019 03; 195:172-185.
    View in: PubMed
    Score: 0.015
  34. Endothelial dysfunction and angiogenesis impairment in the ageing vasculature. Nat Rev Cardiol. 2018 09; 15(9):555-565.
    View in: PubMed
    Score: 0.015
  35. Lifelong reduction in complex IV induces tissue-specific metabolic effects but does not reduce lifespan or healthspan in mice. Aging Cell. 2018 08; 17(4):e12769.
    View in: PubMed
    Score: 0.014
  36. Tetraspanin-enriched microdomains regulate digitation junctions. Cell Mol Life Sci. 2018 09; 75(18):3423-3439.
    View in: PubMed
    Score: 0.014
  37. APache Is an AP2-Interacting Protein Involved in Synaptic Vesicle Trafficking and Neuronal Development. Cell Rep. 2017 Dec 19; 21(12):3596-3611.
    View in: PubMed
    Score: 0.014
  38. Homozygous Expression of Mutant ELOVL4 Leads to Seizures and Death in a Novel Animal Model of Very Long-Chain Fatty Acid Deficiency. Mol Neurobiol. 2018 02; 55(2):1795-1813.
    View in: PubMed
    Score: 0.014
  39. Sexually divergent DNA methylation patterns with hippocampal aging. Aging Cell. 2017 12; 16(6):1342-1352.
    View in: PubMed
    Score: 0.014
  40. Activated signature of antiphospholipid syndrome neutrophils reveals potential therapeutic target. JCI Insight. 2017 09 21; 2(18).
    View in: PubMed
    Score: 0.014
  41. DNA replication timing during development anticipates transcriptional programs and parallels enhancer activation. Genome Res. 2017 08; 27(8):1406-1416.
    View in: PubMed
    Score: 0.014
  42. Role of DNA methylation in the dietary restriction mediated cellular memory. Geroscience. 2017 06; 39(3):331-345.
    View in: PubMed
    Score: 0.014
  43. The Development of Translational Biomarkers as a Tool for Improving the Understanding, Diagnosis and Treatment of Chronic Neuropathic Pain. Mol Neurobiol. 2018 03; 55(3):2420-2430.
    View in: PubMed
    Score: 0.013
  44. Insulin-like growth factor 1 deficiency exacerbates hypertension-induced cerebral microhemorrhages in mice, mimicking the aging phenotype. Aging Cell. 2017 06; 16(3):469-479.
    View in: PubMed
    Score: 0.013
  45. ELTD1, an effective anti-angiogenic target for gliomas: preclinical assessment in mouse GL261 and human G55 xenograft glioma models. Neuro Oncol. 2017 02 01; 19(2):175-185.
    View in: PubMed
    Score: 0.013
  46. Loss of Nrf2 exacerbates the visual deficits and optic neuritis elicited by experimental autoimmune encephalomyelitis. Mol Vis. 2016; 22:1503-1513.
    View in: PubMed
    Score: 0.013
  47. Effects of transgenic methionine sulfoxide reductase A (MsrA) expression on lifespan and age-dependent changes in metabolic function in mice. Redox Biol. 2016 12; 10:251-256.
    View in: PubMed
    Score: 0.013
  48. Circulating IGF-1 deficiency exacerbates hypertension-induced microvascular rarefaction in the mouse hippocampus and retrosplenial cortex: implications for cerebromicrovascular and brain aging. Age (Dordr). 2016 Aug; 38(4):273-289.
    View in: PubMed
    Score: 0.013
  49. IGF-1 deficiency in a critical period early in life influences the vascular aging phenotype in mice by altering miRNA-mediated post-transcriptional gene regulation: implications for the developmental origins of health and disease hypothesis. Age (Dordr). 2016 Aug; 38(4):239-258.
    View in: PubMed
    Score: 0.013
  50. Bisulfite oligonucleotide-capture sequencing for targeted base- and strand-specific absolute 5-methylcytosine quantitation. Age (Dordr). 2016 Jun; 38(3):49.
    View in: PubMed
    Score: 0.013
  51. Myelin-specific Th17 cells induce severe relapsing optic neuritis with irreversible loss of retinal ganglion cells in C57BL/6 mice. Mol Vis. 2016; 22:332-41.
    View in: PubMed
    Score: 0.013
  52. Identification of a novel senolytic agent, navitoclax, targeting the Bcl-2 family of anti-apoptotic factors. Aging Cell. 2016 06; 15(3):428-35.
    View in: PubMed
    Score: 0.012
  53. CNS-wide Sexually Dimorphic Induction of the Major Histocompatibility Complex 1 Pathway With Aging. J Gerontol A Biol Sci Med Sci. 2017 01; 72(1):16-29.
    View in: PubMed
    Score: 0.012
  54. Histone demethylase JMJD2A drives prostate tumorigenesis through transcription factor ETV1. J Clin Invest. 2016 Feb; 126(2):706-20.
    View in: PubMed
    Score: 0.012
  55. Expression profiling of the ubiquitin conjugating enzyme UbcM2 in murine brain reveals modest age-dependent decreases in specific neurons. BMC Neurosci. 2015 Nov 13; 16:76.
    View in: PubMed
    Score: 0.012
  56. Analysis of TMEFF2 allografts and transgenic mouse models reveals roles in prostate regeneration and cancer. Prostate. 2016 Jan; 76(1):97-113.
    View in: PubMed
    Score: 0.012
  57. PDGFRa signaling drives adipose tissue fibrosis by targeting progenitor cell plasticity. Genes Dev. 2015 Jun 01; 29(11):1106-19.
    View in: PubMed
    Score: 0.012
  58. The Achilles' heel of senescent cells: from transcriptome to senolytic drugs. Aging Cell. 2015 Aug; 14(4):644-58.
    View in: PubMed
    Score: 0.012
  59. IL-18 acts in synergy with IL-7 to promote ex vivo expansion of T lymphoid progenitor cells. J Immunol. 2015 Apr 15; 194(8):3820-8.
    View in: PubMed
    Score: 0.012
  60. Aging exacerbates hypertension-induced cerebral microhemorrhages in mice: role of resveratrol treatment in vasoprotection. Aging Cell. 2015 Jun; 14(3):400-8.
    View in: PubMed
    Score: 0.012
  61. Temporal and spatial regulation of epsin abundance and VEGFR3 signaling are required for lymphatic valve formation and function. Sci Signal. 2014 Oct 14; 7(347):ra97.
    View in: PubMed
    Score: 0.011
  62. CD82 restrains pathological angiogenesis by altering lipid raft clustering and CD44 trafficking in endothelial cells. Circulation. 2014 Oct 21; 130(17):1493-504.
    View in: PubMed
    Score: 0.011
  63. Hippocampal subregions exhibit both distinct and shared transcriptomic responses to aging and nonneurodegenerative cognitive decline. J Gerontol A Biol Sci Med Sci. 2014 Nov; 69(11):1311-24.
    View in: PubMed
    Score: 0.011
  64. Caloric restriction confers persistent anti-oxidative, pro-angiogenic, and anti-inflammatory effects and promotes anti-aging miRNA expression profile in cerebromicrovascular endothelial cells of aged rats. Am J Physiol Heart Circ Physiol. 2014 Aug 01; 307(3):H292-306.
    View in: PubMed
    Score: 0.011
  65. Aging exacerbates obesity-induced cerebromicrovascular rarefaction, neurovascular uncoupling, and cognitive decline in mice. J Gerontol A Biol Sci Med Sci. 2014 Nov; 69(11):1339-52.
    View in: PubMed
    Score: 0.011
  66. Functional characterization of the MECP2/IRAK1 lupus risk haplotype in human T cells and a human MECP2 transgenic mouse. J Autoimmun. 2013 Mar; 41:168-74.
    View in: PubMed
    Score: 0.010
  67. Identification and characterization of zebrafish ocular formation genes. Genome. 2008 Mar; 51(3):222-35.
    View in: PubMed
    Score: 0.007
  68. Melatonin administration does not affect isoproterenol-induced LVH. IEEE Eng Med Biol Mag. 2006 May-Jun; 25(3):84-7.
    View in: PubMed
    Score: 0.006
  69. A microarray study of MPP+-treated PC12 Cells: Mechanisms of toxicity (MOT) analysis using bioinformatics tools. BMC Bioinformatics. 2005 Jul 15; 6 Suppl 2:S8.
    View in: PubMed
    Score: 0.006
  70. Differential activation profiles of multiple transcription factors during dendritic cell maturation. J Invest Dermatol. 2005 Apr; 124(4):718-24.
    View in: PubMed
    Score: 0.006
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Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.