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One or more keywords matched the following items that are connected to Gaffney, Patrick
Item TypeName
Concept Alleles
Concept Amino Acid Sequence
Concept Base Sequence
Concept Epistasis, Genetic
Concept Gene Expression Regulation
Concept Gene Frequency
Concept Genes, Dominant
Concept Genes, Immunoglobulin
Concept Genes, Recessive
Concept Major Histocompatibility Complex
Concept Molecular Sequence Data
Concept Genes, ras
Concept Genomic Library
Concept Gene Rearrangement
Concept Gene Deletion
Concept Sequence Homology, Amino Acid
Concept Genes, cdc
Concept Genome, Protozoan
Concept Gene Expression Regulation, Developmental
Concept Gene Dosage
Concept Catalytic Domain
Concept Polymorphism, Single Nucleotide
Concept Genetic Pleiotropy
Concept Metagenome
Concept Gene Expression
Concept Genome, Human
Concept Gene Expression Regulation, Neoplastic
Concept Transcriptome
Concept Exome
Concept Genes, Tumor Suppressor
Concept Genes, myc
Concept Gene Regulatory Networks
Concept Quantitative Trait Loci
Concept Gene Expression Profiling
Concept Gene Order
Concept Gene Knockdown Techniques
Concept Gene Knockout Techniques
Concept Genetic Loci
Academic Article Interferon-inducible gene expression signature in peripheral blood cells of patients with severe lupus.
Academic Article Expression levels for many genes in human peripheral blood cells are highly sensitive to ex vivo incubation.
Academic Article Genetic association of the R620W polymorphism of protein tyrosine phosphatase PTPN22 with human SLE.
Academic Article Complete mitochondrial DNA sequence of the eastern oyster Crassostrea virginica.
Academic Article Identification of IRAK1 as a risk gene with critical role in the pathogenesis of systemic lupus erythematosus.
Academic Article Variants within MECP2, a key transcription regulator, are associated with increased susceptibility to lupus and differential gene expression in patients with systemic lupus erythematosus.
Academic Article Replication of the BANK1 genetic association with systemic lupus erythematosus in a European-derived population.
Academic Article Genetic associations of LYN with systemic lupus erythematosus.
Academic Article Meta-analysis and imputation identifies a 109 kb risk haplotype spanning TNFAIP3 associated with lupus nephritis and hematologic manifestations.
Academic Article Complement receptor 2 polymorphisms associated with systemic lupus erythematosus modulate alternative splicing.
Academic Article Variation in the ATP-binding cassette transporter 2 gene is a separate risk factor for systemic lupus erythematosus within the MHC.
Academic Article Peripheral blood gene expression profiling in Sjögren's syndrome.
Academic Article Variation in the upstream region of P-Selectin (SELP) is a risk factor for SLE.
Academic Article Evidence for gene-gene epistatic interactions among susceptibility loci for systemic lupus erythematosus.
Academic Article Dense genotyping of immune-related disease regions identifies 14 new susceptibility loci for juvenile idiopathic arthritis.
Academic Article Variable association of reactive intermediate genes with systemic lupus erythematosus in populations with different African ancestry.
Academic Article An enhancer element harboring variants associated with systemic lupus erythematosus engages the TNFAIP3 promoter to influence A20 expression.
Academic Article Preferential binding to Elk-1 by SLE-associated IL10 risk allele upregulates IL10 expression.
Academic Article GWAS identifies novel SLE susceptibility genes and explains the association of the HLA region.
Academic Article X Chromosome Dose and Sex Bias in Autoimmune Diseases: Increased Prevalence of 47,XXX in Systemic Lupus Erythematosus and Sjögren's Syndrome.
Academic Article Identification of a gene expression signature associated with recurrent disease in squamous cell carcinoma of the head and neck.
Academic Article Gene expression profiling in human autoimmunity.
Academic Article Identification of new SLE-associated genes with a two-step Bayesian study design.
Academic Article The rs4774 CIITA missense variant is associated with risk of systemic lupus erythematosus.
Academic Article Association of genetic variants in complement factor H and factor H-related genes with systemic lupus erythematosus susceptibility.
Academic Article Genetic and physical interaction of the B-cell systemic lupus erythematosus-associated genes BANK1 and BLK.
Academic Article WITHDRAWN: A female autoimmunity gene exists: DDX3X.
Academic Article Encore: Genetic Association Interaction Network centrality pipeline and application to SLE exome data.
Academic Article MHC associations with clinical and autoantibody manifestations in European SLE.
Academic Article TALEN-mediated enhancer knockout influences TNFAIP3 gene expression and mimics a molecular phenotype associated with systemic lupus erythematosus.
Academic Article Regulatory polymorphisms modulate the expression of HLA class II molecules and promote autoimmunity.
Academic Article Polygenic risk assessment reveals pleiotropy between sarcoidosis and inflammatory disorders in the context of genetic ancestry.
Academic Article Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons.
Academic Article Genetic variants at the 16p13 locus confer risk for eosinophilic esophagitis.
Academic Article Genes associated with early development, apoptosis and cell cycle regulation define a gene expression profile of adenoid cystic carcinoma.
Academic Article Familial aggregation and linkage analysis of autoantibody traits in pedigrees multiplex for systemic lupus erythematosus.
Academic Article A novel polymorphism of the human CD40 receptor with enhanced function.
Academic Article Evaluation of imputation-based association in and around the integrin-alpha-M (ITGAM) gene and replication of robust association between a non-synonymous functional variant within ITGAM and systemic lupus erythematosus (SLE).
Academic Article Analysis of maternal-offspring HLA compatibility, parent-of-origin effects, and noninherited maternal antigen effects for HLA-DRB1 in systemic lupus erythematosus.
Academic Article Exon 6 variants carried on systemic lupus erythematosus (SLE) risk haplotypes modulate IRF5 function.
Academic Article Evaluation of the TREX1 gene in a large multi-ancestral lupus cohort.
Academic Article Analysis of autosomal genes reveals gene-sex interactions and higher total genetic risk in men with systemic lupus erythematosus.
Academic Article Identification of novel coding mutation in C1qA gene in an African-American pedigree with lupus and C1q deficiency.
Academic Article A functional haplotype of UBE2L3 confers risk for systemic lupus erythematosus.
Academic Article Effects of IRF5 lupus risk haplotype on pathways predicted to influence B cell functions.
Academic Article Genetic association of CD247 (CD3?) with SLE in a large-scale multiethnic study.
Academic Article Site-1 protease deficiency causes human skeletal dysplasia due to defective inter-organelle protein trafficking.
Academic Article Enhancer histone-QTLs are enriched on autoimmune risk haplotypes and influence gene expression within chromatin networks.
Academic Article Latent autoimmunity across disease-specific boundaries in at-risk first-degree relatives of SLE and RA patients.
Academic Article Role of Systemic Lupus Erythematosus Risk Variants With Opposing Functional Effects as a Driver of Hypomorphic Expression of TNIP1 and Other Genes Within a Three-Dimensional Chromatin Network.
Academic Article A genome-wide search for susceptibility genes in human systemic lupus erythematosus sib-pair families.
Academic Article Fatal acute lymphoblastic leukemia in mice transgenic for B cell-restricted bcl-xL and c-myc.
Academic Article Keys to unlocking the mysteries of rheumatic autoimmune disease.
Academic Article Fine mapping chromosome 16q12 in a collection of 231 systemic lupus erythematosus sibpair and multiplex families.
Academic Article Meta-analysis of genome-wide linkage studies of systemic lupus erythematosus.
Academic Article Three functional variants of IFN regulatory factor 5 (IRF5) define risk and protective haplotypes for human lupus.
Academic Article Polymorphism at the TNF superfamily gene TNFSF4 confers susceptibility to systemic lupus erythematosus.
Academic Article Genetic analyses of interferon pathway-related genes reveal multiple new loci associated with systemic lupus erythematosus.
Academic Article Identification of novel genetic susceptibility loci in African American lupus patients in a candidate gene association study.
Academic Article Role of MYH9 and APOL1 in African and non-African populations with lupus nephritis.
Academic Article Evaluation of TRAF6 in a large multiancestral lupus cohort.
Academic Article Unraveling multiple MHC gene associations with systemic lupus erythematosus: model choice indicates a role for HLA alleles and non-HLA genes in Europeans.
Academic Article MicroRNA-3148 modulates allelic expression of toll-like receptor 7 variant associated with systemic lupus erythematosus.
Academic Article PTPN22 association in systemic lupus erythematosus (SLE) with respect to individual ancestry and clinical sub-phenotypes.
Academic Article Human effector B lymphocytes express ARID3a and secrete interferon alpha.
Academic Article Mutations in KEOPS-complex genes cause nephrotic syndrome with primary microcephaly.
Academic Article Identification and replication of RNA-Seq gene network modules associated with depression severity.
Academic Article Mapping DNA interaction landscapes in psoriasis susceptibility loci highlights KLF4 as a target gene in 9q31.
Academic Article Correction: Identification and replication of RNA-Seq gene network modules associated with depression severity.
Academic Article Deep sequencing reveals a DAP1 regulatory haplotype that potentiates autoimmunity in systemic lupus erythematosus.
Academic Article Mutations in Spliceosomal Genes PPIL1 and PRP17 Cause Neurodegenerative Pontocerebellar Hypoplasia with Microcephaly.
Grant Epigenome-Guided Causal Variant Discovery and Mechanisms
Grant TNFAIP3 (A20) and Susceptibility to Systemic Lupus Erythematosus
Grant Comprehensive Candidate Pathway Analysis in SLE
Grant Molecular Mechanisms and Genetics of Autoimmunity
Grant Functional Mechanisms of Causal Variants in Systemic Lupus Erythematosus
Grant Comprehensive Candidate Pathway Analysis in SLE
Grant ISOLATION OF A HUMAN SLE SUSCEPTIBILITY GENE ON CHROMOSO
Grant Molecular Mechanisms and Genetics of Autoimmunity
Academic Article CD4+?T cells from children with active juvenile idiopathic arthritis show altered chromatin features associated with transcriptional abnormalities.
Academic Article Chromatin Looping Links Target Genes with Genetic Risk Loci for Dermatological Traits.
Grant Disease and Race Specific Single-cell Epigenetic Mechanisms in Human SLE
Academic Article Variants on the UBE2L3/YDJC Autoimmune Disease Risk Haplotype Increase UBE2L3 Expression by Modulating CCCTC-Binding Factor and YY1 Binding.
Academic Article Deficiencies in the DNA Binding Protein ARID3a Alter Chromatin Structures Important for Early Human Erythropoiesis.
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