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Jizhong Zhou

TitleProfessor
InstitutionUniversity of Oklahoma, Norman
DepartmentMicrobiology and Plant Biology
Addressn/a
770 Van Vleet Oval
Norman OK 73019
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Zhu C, Wu L, Ning D, Tian R, Gao S, Zhang B, Zhao J, Zhang Y, Xiao N, Wang Y, Brown MR, Tu Q, Global Water Microbiome Consortium, Ju F, Wells GF, Guo J, He Z, Nielsen PH, Wang A, Zhang Y, Chen T, He Q, Criddle CS, Wagner M, Tiedje JM, Curtis TP, Wen X, Yang Y, Alvarez-Cohen L, Stahl DA, Alvarez PJJ, Rittmann BE, Zhou J. Global diversity and distribution of antibiotic resistance genes in human wastewater treatment systems. Nat Commun. 2025 Apr 29; 16(1):4006. PMID: 40301344; PMCID: PMC12041579.
      Citations: 1     Fields:    Translation:HumansCellsPHPublic Health
    2. Fan Y, Wang D, Yang JX, Ning D, He Z, Zhang P, Rocha AM, Xiao N, Michael JP, Walker KF, Joyner DC, Pan C, Adams MWW, Fields MW, Alm EJ, Stahl DA, Hazen TC, Adams PD, Arkin AP, Zhou J. Modest functional diversity decline and pronounced composition shifts of microbial communities in a mixed waste-contaminated aquifer. Microbiome. 2025 Apr 28; 13(1):106. PMID: 40296156; PMCID: PMC12036129.
      Citations:    Fields:    Translation:Cells
    3. Michael JP, Putt AD, Yang Y, Adams BG, McBride KR, Fan Y, Lowe KA, Ning D, Jagadamma S, Moon JW, Klingeman DM, Zhang P, Fu Y, Hazen TC, Zhou J. Reproducible responses of geochemical and microbial successional patterns in the subsurface to carbon source amendment. Water Res. 2024 May 15; 255:121460. PMID: 38552495.
      Citations: 1     Fields:    Translation:PHPublic Health
    4. Tao X, Yang Z, Feng J, Jian S, Yang Y, Bates CT, Wang G, Guo X, Ning D, Kempher ML, Liu XJA, Ouyang Y, Han S, Wu L, Zeng Y, Kuang J, Zhang Y, Zhou X, Shi Z, Qin W, Wang J, Firestone MK, Tiedje JM, Zhou J. Experimental warming accelerates positive soil priming in a temperate grassland ecosystem. Nat Commun. 2024 Feb 08; 15(1):1178. PMID: 38331994; PMCID: PMC10853207.
      Citations: 7     Fields:    
    5. Ning D, Wang Y, Fan Y, Wang J, Van Nostrand JD, Wu L, Zhang P, Curtis DJ, Tian R, Lui L, Hazen TC, Alm EJ, Fields MW, Poole F, Adams MWW, Chakraborty R, Stahl DA, Adams PD, Arkin AP, He Z, Zhou J. Environmental stress mediates groundwater microbial community assembly. Nat Microbiol. 2024 Jan 11. PMID: 38212658.
      Citations: 23     Fields:    
    6. Tian J, Dungait JAJ, Hou R, Deng Y, Hartley IP, Yang Y, Kuzyakov Y, Zhang F, Cotrufo MF, Zhou J. Microbially mediated mechanisms underlie soil carbon accrual by conservation agriculture under decade-long warming. Nat Commun. 2024 01 08; 15(1):377. PMID: 38191568; PMCID: PMC10774409.
      Citations: 16     Fields:    Translation:Animals
    7. Cornell CR, Zhang Y, Ning D, Xiao N, Wagle P, Xiao X, Zhou J. Land use conversion increases network complexity and stability of soil microbial communities in a temperate grassland. ISME J. 2023 Oct 13. PMID: 37833523.
      Citations: 20     Fields:    Translation:PHPublic Health
    8. Xu T, Tao X, He H, Kempher ML, Zhang S, Liu X, Wang J, Wang D, Ning D, Pan C, Ge H, Zhang N, He YX, Zhou J. Functional and structural diversification of incomplete phosphotransferase system in cellulose-degrading clostridia. ISME J. 2023 06; 17(6):823-835. PMID: 36899058; PMCID: PMC10203250.
      Citations: 4     Fields:    Translation:Cells
    9. Tao X, Morgan JS, Liu J, Kempher ML, Xu T, Zhou J. Target integration of an exogenous ?-glucosidase enhances cellulose degradation and ethanol production in Clostridium cellulolyticum. Bioresour Technol. 2023 May; 376:128849. PMID: 36898565.
      Citations: 3     Fields:    Translation:Cells
    10. Ma X, Wang T, Shi Z, Chiariello NR, Docherty K, Field CB, Gutknecht J, Gao Q, Gu Y, Guo X, Hungate BA, Lei J, Niboyet A, Le Roux X, Yuan M, Yuan T, Zhou J, Yang Y. Correction: Long-term nitrogen deposition enhances microbial capacities in soil carbon stabilization but reduces network complexity. Microbiome. 2022 Sep 03; 10(1):144. PMID: 36056428; PMCID: PMC9440569.
      Citations: 2     Fields:    
    11. Ma X, Wang T, Shi Z, Chiariello NR, Docherty K, Field CB, Gutknecht J, Gao Q, Gu Y, Guo X, Hungate BA, Lei J, Niboyet A, Le Roux X, Yuan M, Yuan T, Zhou J, Yang Y. Long-term nitrogen deposition enhances microbial capacities in soil carbon stabilization but reduces network complexity. Microbiome. 2022 07 28; 10(1):112. PMID: 35902889; PMCID: PMC9330674.
      Citations: 17     Fields:    Translation:PHPublic Health
    12. Wu L, Zhang Y, Guo X, Ning D, Zhou X, Feng J, Yuan MM, Liu S, Guo J, Gao Z, Ma J, Kuang J, Jian S, Han S, Yang Z, Ouyang Y, Fu Y, Xiao N, Liu X, Wu L, Zhou A, Yang Y, Tiedje JM, Zhou J. Reduction of microbial diversity in grassland soil is driven by long-term climate warming. Nat Microbiol. 2022 07; 7(7):1054-1062. PMID: 35697795.
      Citations: 60     Fields:    Translation:CellsPHPublic Health
    13. Xiao N, Zhou A, Kempher ML, Zhou BY, Shi ZJ, Yuan M, Guo X, Wu L, Ning D, Van Nostrand J, Firestone MK, Zhou J. Disentangling direct from indirect relationships in association networks. Proc Natl Acad Sci U S A. 2022 01 11; 119(2). PMID: 34992138.
      Citations: 34     Fields:    
    14. Xu T, Tao X, Kempher ML, Zhou J. Cas9 Nickase-Based Genome Editing in Clostridium cellulolyticum. Methods Mol Biol. 2022; 2479:227-243. PMID: 35583742.
      Citations:    Fields:    Translation:Cells
    15. Bates CT, Escalas A, Kuang J, Hale L, Wang Y, Herman D, Nuccio EE, Wan X, Bhattacharyya A, Fu Y, Tian R, Wang G, Ning D, Yang Y, Wu L, Pett-Ridge J, Saha M, Craven K, Brodie EL, Firestone M, Zhou J. Conversion of marginal land into switchgrass conditionally accrues soil carbon but reduces methane consumption. ISME J. 2022 01; 16(1):10-25. PMID: 34211103; PMCID: PMC8692414.
      Citations: 2     Fields:    Translation:Animals
    16. Cheng J, Han Z, Cong J, Yu J, Zhou J, Zhao M, Zhang Y. Edaphic variables are better indicators of soil microbial functional structure than plant-related ones in subtropical broad-leaved forests. Sci Total Environ. 2021 Jun 15; 773:145630. PMID: 33582323.
      Citations: 4     Fields:    Translation:AnimalsPHPublic Health
    17. Gao Q, Wang G, Xue K, Yang Y, Xie J, Yu H, Bai S, Liu F, He Z, Ning D, Hobbie SE, Reich PB, Zhou J. Stimulation of soil respiration by elevated CO2 is enhanced under nitrogen limitation in a decade-long grassland study. Proc Natl Acad Sci U S A. 2020 12 29; 117(52):33317-33324. PMID: 33318221; PMCID: PMC7777058.
      Citations: 11     Fields:    Translation:CellsPHPublic Health
    18. Guo X, Gao Q, Yuan M, Wang G, Zhou X, Feng J, Shi Z, Hale L, Wu L, Zhou A, Tian R, Liu F, Wu B, Chen L, Jung CG, Niu S, Li D, Xu X, Jiang L, Escalas A, Wu L, He Z, Van Nostrand JD, Ning D, Liu X, Yang Y, Schuur EAG, Konstantinidis KT, Cole JR, Penton CR, Luo Y, Tiedje JM, Zhou J. Gene-informed decomposition model predicts lower soil carbon loss due to persistent microbial adaptation to warming. Nat Commun. 2020 09 29; 11(1):4897. PMID: 32994415; PMCID: PMC7524716.
      Citations: 31     Fields:    Translation:AnimalsCellsPHPublic Health
    19. Ning D, Yuan M, Wu L, Zhang Y, Guo X, Zhou X, Yang Y, Arkin AP, Firestone MK, Zhou J. A quantitative framework reveals ecological drivers of grassland microbial community assembly in response to warming. Nat Commun. 2020 09 18; 11(1):4717. PMID: 32948774; PMCID: PMC7501310.
      Citations: 275     Fields:    Translation:AnimalsCells
    20. Wu B, Liu F, Zhou A, Li J, Shu L, Kempher ML, Yang X, Ning D, Pan F, Zane GM, Wall JD, Van Nostrand JD, Juneau P, Chen S, Yan Q, Zhou J, He Z. Experimental evolution reveals nitrate tolerance mechanisms in Desulfovibrio vulgaris. ISME J. 2020 11; 14(11):2862-2876. PMID: 32934357.
      Citations: 5     Fields:    Translation:Cells
    21. He Z, Deng Y, Xu M, Li J, Liang J, Xiong J, Yu H, Wu B, Wu L, Xue K, Shi S, Carrillo Y, Van Nostrand JD, Hobbie SE, Reich PB, Schadt CW, Kent AD, Pendall E, Wallenstein M, Luo Y, Yan Q, Zhou J. Microbial functional genes commonly respond to elevated carbon dioxide. Environ Int. 2020 11; 144:106068. PMID: 32871382.
      Citations: 1     Fields:    Translation:PHPublic Health
    22. Kempher ML, Tao X, Song R, Wu B, Stahl DA, Wall JD, Arkin AP, Zhou A, Zhou J. Effects of Genetic and Physiological Divergence on the Evolution of a Sulfate-Reducing Bacterium under Conditions of Elevated Temperature. mBio. 2020 08 18; 11(4). PMID: 32817099.
      Citations: 6     Fields:    Translation:Cells
    23. Li E, Deng T, Yan L, Zhou J, He Z, Deng Y, Xu M. Elevated nitrate simplifies microbial community compositions and interactions in sulfide-rich river sediments. Sci Total Environ. 2021 Jan 01; 750:141513. PMID: 32853935.
      Citations: 7     Fields:    Translation:Cells
    24. Tao X, Feng J, Yang Y, Wang G, Tian R, Fan F, Ning D, Bates CT, Hale L, Yuan MM, Wu L, Gao Q, Lei J, Schuur EAG, Yu J, Bracho R, Luo Y, Konstantinidis KT, Johnston ER, Cole JR, Penton CR, Tiedje JM, Zhou J. Winter warming in Alaska accelerates lignin decomposition contributed by Proteobacteria. Microbiome. 2020 06 05; 8(1):84. PMID: 32503635.
      Citations: 17     Fields:    Translation:CellsPHPublic Health
    25. Tao X, Xu T, Kempher ML, Liu J, Zhou J. Precise promoter integration improves cellulose bioconversion and thermotolerance in Clostridium cellulolyticum. Metab Eng. 2020 07; 60:110-118. PMID: 32294528.
      Citations: 7     Fields:    Translation:Cells
    26. Tian R, Ning D, He Z, Zhang P, Spencer SJ, Gao S, Shi W, Wu L, Zhang Y, Yang Y, Adams BG, Rocha AM, Detienne BL, Lowe KA, Joyner DC, Klingeman DM, Arkin AP, Fields MW, Hazen TC, Stahl DA, Alm EJ, Zhou J. Small and mighty: adaptation of superphylum Patescibacteria to groundwater environment drives their genome simplicity. Microbiome. 2020 04 06; 8(1):51. PMID: 32252814.
      Citations: 118     Fields:    Translation:Cells
    27. Feng J, Wang C, Lei J, Yang Y, Yan Q, Zhou X, Tao X, Ning D, Yuan MM, Qin Y, Shi ZJ, Guo X, He Z, Van Nostrand JD, Wu L, Bracho-Garillo RG, Penton CR, Cole JR, Konstantinidis KT, Luo Y, Schuur EAG, Tiedje JM, Zhou J. Warming-induced permafrost thaw exacerbates tundra soil carbon decomposition mediated by microbial community. Microbiome. 2020 01 17; 8(1):3. PMID: 31952472.
      Citations: 26     Fields:    Translation:PHPublic Health
    28. Wu L, Ning D, Zhang B, Li Y, Zhang P, Shan X, Zhang Q, Brown MR, Li Z, Van Nostrand JD, Ling F, Xiao N, Zhang Y, Vierheilig J, Wells GF, Yang Y, Deng Y, Tu Q, Wang A, Global Water Microbiome Consortium, Zhang T, He Z, Keller J, Nielsen PH, Alvarez PJJ, Criddle CS, Wagner M, Tiedje JM, He Q, Curtis TP, Stahl DA, Alvarez-Cohen L, Rittmann BE, Wen X, Zhou J. Author Correction: Global diversity and biogeography of bacterial communities in wastewater treatment plants. Nat Microbiol. 2019 Dec; 4(12):2579. PMID: 31728072.
      Citations: 5     Fields:    
    29. Ning D, Deng Y, Tiedje JM, Zhou J. A general framework for quantitatively assessing ecological stochasticity. Proc Natl Acad Sci U S A. 2019 08 20; 116(34):16892-16898. PMID: 31391302; PMCID: PMC6708315.
      Citations: 239     Fields:    
    30. Hale L, Feng W, Yin H, Guo X, Zhou X, Bracho R, Pegoraro E, Penton CR, Wu L, Cole J, Konstantinidis KT, Luo Y, Tiedje JM, Schuur EAG, Zhou J. Tundra microbial community taxa and traits predict decomposition parameters of stable, old soil organic carbon. ISME J. 2019 12; 13(12):2901-2915. PMID: 31384013.
      Citations: 12     Fields:    Translation:AnimalsCellsPHPublic Health
    31. Shi Z, Yin H, Van Nostrand JD, Voordeckers JW, Tu Q, Deng Y, Yuan M, Zhou A, Zhang P, Xiao N, Ning D, He Z, Wu L, Zhou J. Functional Gene Array-Based Ultrasensitive and Quantitative Detection of Microbial Populations in Complex Communities. mSystems. 2019 Jun 18; 4(4). PMID: 31213523.
      Citations: 19     Fields:    
    32. Wu L, Ning D, Zhang B, Li Y, Zhang P, Shan X, Zhang Q, Brown MR, Li Z, Van Nostrand JD, Ling F, Xiao N, Zhang Y, Vierheilig J, Wells GF, Yang Y, Deng Y, Tu Q, Wang A, Global Water Microbiome Consortium, Zhang T, He Z, Keller J, Nielsen PH, Alvarez PJJ, Criddle CS, Wagner M, Tiedje JM, He Q, Curtis TP, Stahl DA, Alvarez-Cohen L, Rittmann BE, Wen X, Zhou J. Global diversity and biogeography of bacterial communities in wastewater treatment plants. Nat Microbiol. 2019 07; 4(7):1183-1195. PMID: 31086312.
      Citations: 187     Fields:    Translation:CellsPHPublic Health
    33. Zhao M, Lu X, Zhao H, Yang Y, Hale L, Gao Q, Liu W, Guo J, Li Q, Zhou J, Wan F. Ageratina adenophora invasions are associated with microbially mediated differences in biogeochemical cycles. Sci Total Environ. 2019 Aug 10; 677:47-56. PMID: 31051382.
      Citations: 18     Fields:    Translation:AnimalsPHPublic Health
    34. Guo X, Zhou X, Hale L, Yuan M, Ning D, Feng J, Shi Z, Li Z, Feng B, Gao Q, Wu L, Shi W, Zhou A, Fu Y, Wu L, He Z, Van Nostrand JD, Qiu G, Liu X, Luo Y, Tiedje JM, Yang Y, Zhou J. Climate warming accelerates temporal scaling of grassland soil microbial biodiversity. Nat Ecol Evol. 2019 04; 3(4):612-619. PMID: 30911147.
      Citations: 38     Fields:    Translation:AnimalsCellsPHPublic Health
    35. Feng J, Penton CR, He Z, Van Nostrand JD, Yuan MM, Wu L, Wang C, Qin Y, Shi ZJ, Guo X, Schuur EAG, Luo Y, Bracho R, Konstantinidis KT, Cole JR, Tiedje JM, Yang Y, Zhou J. Long-Term Warming in Alaska Enlarges the Diazotrophic Community in Deep Soils. mBio. 2019 02 26; 10(1). PMID: 30808694.
      Citations: 12     Fields:    Translation:CellsPHPublic Health
    36. He Z, Zhang P, Wu L, Rocha AM, Tu Q, Shi Z, Wu B, Qin Y, Wang J, Yan Q, Curtis D, Ning D, Van Nostrand JD, Wu L, Yang Y, Elias DA, Watson DB, Adams MWW, Fields MW, Alm EJ, Hazen TC, Adams PD, Arkin AP, Zhou J. Microbial Functional Gene Diversity Predicts Groundwater Contamination and Ecosystem Functioning. mBio. 2018 02 20; 9(1). PMID: 29463661.
      Citations: 17     Fields:    Translation:PHPublic Health
    37. Zhou A, Lau R, Baran R, Ma J, von Netzer F, Shi W, Gorman-Lewis D, Kempher ML, He Z, Qin Y, Shi Z, Zane GM, Wu L, Bowen BP, Northen TR, Hillesland KL, Stahl DA, Wall JD, Arkin AP, Zhou J. Key Metabolites and Mechanistic Changes for Salt Tolerance in an Experimentally Evolved Sulfate-Reducing Bacterium, Desulfovibrio vulgaris. mBio. 2017 11 14; 8(6). PMID: 29138306.
      Citations: 6     Fields:    Translation:Cells
    38. Zhou J, Ning D. Stochastic Community Assembly: Does It Matter in Microbial Ecology? Microbiol Mol Biol Rev. 2017 12; 81(4). PMID: 29021219.
      Citations: 665     Fields:    Translation:HumansAnimals
    39. He J, Tu Q, Ge Y, Qin Y, Cui B, Hu X, Wang Y, Deng Y, Wang K, Van Nostrand JD, Li J, Zhou J, Li Y, Zhou X. Taxonomic and Functional Analyses of the Supragingival Microbiome from Caries-Affected and Caries-Free Hosts. Microb Ecol. 2018 Feb; 75(2):543-554. PMID: 28932895.
      Citations: 23     Fields:    Translation:HumansCells
    40. Tu Q, Li J, Shi Z, Chen Y, Lin L, Li J, Wang H, Yan J, Zhou Q, Li X, Li L, Zhou J, He Z. HuMiChip2 for strain level identification and functional profiling of human microbiomes. Appl Microbiol Biotechnol. 2017 Jan; 101(1):423-435. PMID: 27734124.
      Citations: 7     Fields:    Translation:HumansCells
    41. Xue K, Yuan MM, Xie J, Li D, Qin Y, Hale LE, Wu L, Deng Y, He Z, Van Nostrand JD, Luo Y, Tiedje JM, Zhou J. Annual Removal of Aboveground Plant Biomass Alters Soil Microbial Responses to Warming. mBio. 2016 Sep 27; 7(5). PMID: 27677789.
      Citations: 7     Fields:    
    42. Qiu D, Xie M, Dai J, An W, Wei H, Tian C, Kempher ML, Zhou A, He Z, Gu B, Zhou J. Differential Regulation of the Two Ferrochelatase Paralogues in Shewanella loihica PV-4 in Response to Environmental Stresses. Appl Environ Microbiol. 2016 09 01; 82(17):5077-88. PMID: 27287322.
      Citations: 6     Fields:    Translation:Cells
    43. Wu L, Yang Y, Chen S, Zhao M, Zhu Z, Yang S, Qu Y, Ma Q, He Z, Zhou J, He Q. Long-term successional dynamics of microbial association networks in anaerobic digestion processes. Water Res. 2016 Nov 01; 104:1-10. PMID: 27497626.
      Citations: 43     Fields:    Translation:Cells
    44. Hemme CL, Green SJ, Rishishwar L, Prakash O, Pettenato A, Chakraborty R, Deutschbauer AM, Van Nostrand JD, Wu L, He Z, Jordan IK, Hazen TC, Arkin AP, Kostka JE, Zhou J. Lateral Gene Transfer in a Heavy Metal-Contaminated-Groundwater Microbial Community. mBio. 2016 Apr 05; 7(2):e02234-15. PMID: 27048805.
      Citations: 44     Fields:    Translation:Cells
    45. Van Nostrand JD, Yin H, Wu L, Yuan T, Zhou J. Hybridization of Environmental Microbial Community Nucleic Acids by GeoChip. Methods Mol Biol. 2016; 1399:183-96. PMID: 26791504.
      Citations: 11     Fields:    Translation:AnimalsCellsPHPublic Health
    46. Myung J, Galega WM, Van Nostrand JD, Yuan T, Zhou J, Criddle CS. Long-term cultivation of a stable Methylocystis-dominated methanotrophic enrichment enabling tailored production of poly(3-hydroxybutyrate-co-3-hydroxyvalerate). Bioresour Technol. 2015 Dec; 198:811-8. PMID: 26454368.
      Citations: 18     Fields:    Translation:Cells
    47. Tu Q, Zhou X, He Z, Xue K, Wu L, Reich P, Hobbie S, Zhou J. The Diversity and Co-occurrence Patterns of N2-Fixing Communities in a CO2-Enriched Grassland Ecosystem. Microb Ecol. 2016 Apr; 71(3):604-15. PMID: 26280746.
      Citations: 11     Fields:    Translation:CellsPHPublic Health
    48. Wu L, Wen C, Qin Y, Yin H, Tu Q, Van Nostrand JD, Yuan T, Yuan M, Deng Y, Zhou J. Phasing amplicon sequencing on Illumina Miseq for robust environmental microbial community analysis. BMC Microbiol. 2015 Jun 19; 15:125. PMID: 26084274; PMCID: PMC4472414.
      Citations: 117     Fields:    Translation:HumansCellsPHPublic Health
    49. Xu T, Li Y, Shi Z, Hemme CL, Li Y, Zhu Y, Van Nostrand JD, He Z, Zhou J. Efficient Genome Editing in Clostridium cellulolyticum via CRISPR-Cas9 Nickase. Appl Environ Microbiol. 2015 Jul; 81(13):4423-31. PMID: 25911483.
      Citations: 101     Fields:    Translation:Cells
    50. Zhang P, Wu WM, Van Nostrand JD, Deng Y, He Z, Gihring T, Zhang G, Schadt CW, Watson D, Jardine P, Criddle CS, Brooks S, Marsh TL, Tiedje JM, Arkin AP, Zhou J. Dynamic Succession of Groundwater Functional Microbial Communities in Response to Emulsified Vegetable Oil Amendment during Sustained In Situ U(VI) Reduction. Appl Environ Microbiol. 2015 Jun 15; 81(12):4164-72. PMID: 25862231.
      Citations: 8     Fields:    Translation:PHPublic Health
    51. Liang Y, Wu L, Clark IM, Xue K, Yang Y, Van Nostrand JD, Deng Y, He Z, McGrath S, Storkey J, Hirsch PR, Sun B, Zhou J. Over 150 years of long-term fertilization alters spatial scaling of microbial biodiversity. mBio. 2015 Apr 07; 6(2). PMID: 25852161; PMCID: PMC4453543.
      Citations: 21     Fields:    Translation:AnimalsCellsPHPublic Health
    52. Dai J, Wei H, Tian C, Damron FH, Zhou J, Qiu D. An extracytoplasmic function sigma factor-dependent periplasmic glutathione peroxidase is involved in oxidative stress response of Shewanella oneidensis. BMC Microbiol. 2015 Feb 18; 15:34. PMID: 25887418; PMCID: PMC4336711.
      Citations: 20     Fields:    Translation:Cells
    53. Zhou J, He Z, Yang Y, Deng Y, Tringe SG, Alvarez-Cohen L. High-throughput metagenomic technologies for complex microbial community analysis: open and closed formats. mBio. 2015 Jan 27; 6(1). PMID: 25626903.
      Citations: 128     Fields:    Translation:CellsPHPublic Health
    54. Tu Q, Yuan M, He Z, Deng Y, Xue K, Wu L, Hobbie SE, Reich PB, Zhou J. Fungal communities respond to long-term CO2 elevation by community reassembly. Appl Environ Microbiol. 2015 Apr; 81(7):2445-54. PMID: 25616796.
      Citations: 10     Fields:    Translation:AnimalsPHPublic Health
    55. Chen Y, Qin N, Guo J, Qian G, Fang D, Shi D, Xu M, Yang F, He Z, Van Nostrand JD, Yuan T, Deng Y, Zhou J, Li L. Functional gene arrays-based analysis of fecal microbiomes in patients with liver cirrhosis. BMC Genomics. 2014 Sep 02; 15:753. PMID: 25179593; PMCID: PMC4171554.
      Citations: 24     Fields:    Translation:Humans
    56. Li Y, Xu T, Tschaplinski TJ, Engle NL, Yang Y, Graham DE, He Z, Zhou J. Improvement of cellulose catabolism in Clostridium cellulolyticum by sporulation abolishment and carbon alleviation. Biotechnol Biofuels. 2014 Feb 20; 7(1):25. PMID: 24555718; PMCID: PMC3936895.
      Citations: 7     
    57. Yuan Y, Chen C, Liang B, Huang C, Zhao Y, Xu X, Tan W, Zhou X, Gao S, Sun D, Lee D, Zhou J, Wang A. Fine-tuning key parameters of an integrated reactor system for the simultaneous removal of COD, sulfate and ammonium and elemental sulfur reclamation. J Hazard Mater. 2014 Mar 30; 269:56-67. PMID: 24373982.
      Citations: 2     Fields:    Translation:CellsPHPublic Health
    58. He Z, Xiong J, Kent AD, Deng Y, Xue K, Wang G, Wu L, Van Nostrand JD, Zhou J. Distinct responses of soil microbial communities to elevated CO2 and O3 in a soybean agro-ecosystem. ISME J. 2014 Mar; 8(3):714-726. PMID: 24108327.
      Citations: 17     Fields:    Translation:AnimalsPHPublic Health
    59. Zhou J, Jiang YH, Deng Y, Shi Z, Zhou BY, Xue K, Wu L, He Z, Yang Y. Random sampling process leads to overestimation of ß-diversity of microbial communities. mBio. 2013 Jun 11; 4(3):e00324-13. PMID: 23760464.
      Citations: 33     Fields:    Translation:PHPublic Health
    60. Zhou J, Liu W, Deng Y, Jiang YH, Xue K, He Z, Van Nostrand JD, Wu L, Yang Y, Wang A. Stochastic assembly leads to alternative communities with distinct functions in a bioreactor microbial community. mBio. 2013 Mar 05; 4(2). PMID: 23462114.
      Citations: 123     Fields:    
    61. Zhou J, Deng Y, Luo F, He Z, Yang Y. Phylogenetic molecular ecological network of soil microbial communities in response to elevated CO2. mBio. 2011; 2(4). PMID: 21791581.
      Citations: 262     Fields:    Translation:CellsPHPublic Health
    62. Zhou J, He Q, Hemme CL, Mukhopadhyay A, Hillesland K, Zhou A, He Z, Van Nostrand JD, Hazen TC, Stahl DA, Wall JD, Arkin AP. How sulphate-reducing microorganisms cope with stress: lessons from systems biology. Nat Rev Microbiol. 2011 Jun; 9(6):452-66. PMID: 21572460.
      Citations: 60     Fields:    Translation:CellsPHPublic Health
    63. Zhou J, Wu L, Deng Y, Zhi X, Jiang YH, Tu Q, Xie J, Van Nostrand JD, He Z, Yang Y. Reproducibility and quantitation of amplicon sequencing-based detection. ISME J. 2011 Aug; 5(8):1303-13. PMID: 21346791.
      Citations: 184     Fields:    Translation:CellsPHPublic Health
    64. Zhou J, Deng Y, Luo F, He Z, Tu Q, Zhi X. Functional molecular ecological networks. mBio. 2010 Oct 05; 1(4). PMID: 20941329.
      Citations: 292     Fields:    Translation:CellsPHPublic Health
    65. Zhou J, Kang S, Schadt CW, Garten CT. Spatial scaling of functional gene diversity across various microbial taxa. Proc Natl Acad Sci U S A. 2008 Jun 03; 105(22):7768-73. PMID: 18509054.
      Citations: 95     Fields:    Translation:PHPublic Health
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