Susan Schroeder to RNA
This is a "connection" page, showing publications Susan Schroeder has written about RNA.
Connection Strength
4.115
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Challenges and approaches to predicting RNA with multiple functional structures. RNA. 2018 12; 24(12):1615-1624.
Score: 0.578
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Swellix: a computational tool to explore RNA conformational space. BMC Bioinformatics. 2017 Nov 21; 18(1):504.
Score: 0.549
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Crumple: An Efficient Tool to Explore Thoroughly the RNA Folding Landscape. Methods Mol Biol. 2016; 1490:1-14.
Score: 0.481
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Structures and Energetics of Four Adjacent G·U Pairs That Stabilize an RNA Helix. J Phys Chem B. 2015 Oct 22; 119(42):13252-61.
Score: 0.474
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A parallel implementation of the Wuchty algorithm with additional experimental filters to more thoroughly explore RNA conformational space. PLoS One. 2015; 10(2):e0117217.
Score: 0.453
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Crumple: a method for complete enumeration of all possible pseudoknot-free RNA secondary structures. PLoS One. 2012; 7(12):e52414.
Score: 0.391
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Optical melting measurements of nucleic acid thermodynamics. Methods Enzymol. 2009; 468:371-87.
Score: 0.315
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Nearest neighbor rules for RNA helix folding thermodynamics: improved end effects. Nucleic Acids Res. 2022 05 20; 50(9):5251-5262.
Score: 0.187
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Thermodynamic stabilities of internal loops with GU closing pairs in RNA. Biochemistry. 2001 Sep 25; 40(38):11509-17.
Score: 0.179
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Factors affecting the thermodynamic stability of small asymmetric internal loops in RNA. Biochemistry. 2000 Aug 08; 39(31):9257-74.
Score: 0.166
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The energetics of small internal loops in RNA. Biopolymers. 1999-2000; 52(4):157-67.
Score: 0.148
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Surprising Sequence Effects on GU Closure of Symmetric 2 × 2 Nucleotide RNA Internal Loops. Biochemistry. 2018 04 10; 57(14):2121-2131.
Score: 0.140
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Thermodynamic parameters for an expanded nearest-neighbor model for formation of RNA duplexes with Watson-Crick base pairs. Biochemistry. 1998 Oct 20; 37(42):14719-35.
Score: 0.037
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NMR structures of (rGCUGAGGCU)2 and (rGCGGAUGCU)2: probing the structural features that shape the thermodynamic stability of GA pairs. Biochemistry. 2007 Feb 13; 46(6):1511-22.
Score: 0.016