Susan Schroeder to Thermodynamics
This is a "connection" page, showing publications Susan Schroeder has written about Thermodynamics.
Connection Strength
2.918
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Challenges and approaches to predicting RNA with multiple functional structures. RNA. 2018 12; 24(12):1615-1624.
Score: 0.601
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Advancing viral RNA structure prediction: measuring the thermodynamics of pyrimidine-rich internal loops. RNA. 2017 05; 23(5):770-781.
Score: 0.541
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Effects of salt, polyethylene glycol, and locked nucleic acids on the thermodynamic stabilities of consecutive terminal adenosine mismatches in RNA duplexes. J Phys Chem B. 2013 Apr 04; 117(13):3531-40.
Score: 0.413
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3' terminal nucleotides determine thermodynamic stabilities of mismatches at the ends of RNA helices. Biochemistry. 2008 Dec 16; 47(50):13418-27.
Score: 0.307
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Factors affecting the thermodynamic stability of small asymmetric internal loops in RNA. Biochemistry. 2000 Aug 08; 39(31):9257-74.
Score: 0.172
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Surprising Sequence Effects on GU Closure of Symmetric 2 × 2 Nucleotide RNA Internal Loops. Biochemistry. 2018 04 10; 57(14):2121-2131.
Score: 0.146
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Swellix: a computational tool to explore RNA conformational space. BMC Bioinformatics. 2017 Nov 21; 18(1):504.
Score: 0.142
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Thermodynamic stabilities of three-way junction nanomotifs in prohead RNA. RNA. 2017 04; 23(4):521-529.
Score: 0.134
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Consecutive terminal GU pairs stabilize RNA helices. Biochemistry. 2010 Dec 14; 49(49):10574-81.
Score: 0.088
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Optical melting measurements of nucleic acid thermodynamics. Methods Enzymol. 2009; 468:371-87.
Score: 0.082
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Thermodynamic stability and structural features of the J4/5 loop in a Pneumocystis carinii group I intron. Biochemistry. 2003 Dec 09; 42(48):14184-96.
Score: 0.054
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Sheared Aanti.Aanti base pairs in a destabilizing 2 x 2 internal loop: the NMR structure of 5'(rGGCAAGCCU)2. Biochemistry. 2002 Dec 17; 41(50):14969-77.
Score: 0.051
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Nearest neighbor rules for RNA helix folding thermodynamics: improved end effects. Nucleic Acids Res. 2022 05 20; 50(9):5251-5262.
Score: 0.049
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Thermodynamic stabilities of internal loops with GU closing pairs in RNA. Biochemistry. 2001 Sep 25; 40(38):11509-17.
Score: 0.046
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The energetics of small internal loops in RNA. Biopolymers. 1999-2000; 52(4):157-67.
Score: 0.038
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Thermodynamic parameters for an expanded nearest-neighbor model for formation of RNA duplexes with Watson-Crick base pairs. Biochemistry. 1998 Oct 20; 37(42):14719-35.
Score: 0.038
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NMR structures of (rGCUGAGGCU)2 and (rGCGGAUGCU)2: probing the structural features that shape the thermodynamic stability of GA pairs. Biochemistry. 2007 Feb 13; 46(6):1511-22.
Score: 0.017