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Christina Warinner

TitleAssistant Professor
InstitutionUniversity of Oklahoma, Norman
AddressSRTC, Room 2090
Norman OK 73019
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    R01GM089886     (LEWIS, CECIL M)Jul 1, 2011 - Jun 30, 2021
    Microbial Ecologies of Indigenous Communities
    Role: Co-Principal Investigator

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Fellows Yates JA, Velsko IM, Aron F, Posth C, Hofman CA, Austin RM, Parker CE, Mann AE, Nägele K, Arthur KW, Arthur JW, Bauer CC, Crevecoeur I, Cupillard C, Curtis MC, Dalén L, Díaz-Zorita Bonilla M, Díez Fernández-Lomana JC, Drucker DG, Escribano Escrivá E, Francken M, Gibbon VE, González Morales MR, Grande Mateu A, Harvati K, Henry AG, Humphrey L, Menéndez M, Mihailovic D, Peresani M, Rodríguez Moroder S, Roksandic M, Rougier H, Sázelová S, Stock JT, Straus LG, Svoboda J, Teßmann B, Walker MJ, Power RC, Lewis CM, Sankaranarayanan K, Guschanski K, Wrangham RW, Dewhirst FE, Salazar-García DC, Krause J, Herbig A, Warinner C. The evolution and changing ecology of the African hominid oral microbiome. Proc Natl Acad Sci U S A. 2021 May 18; 118(20). PMID: 33972424.
      Citations:    Fields:    
    2. Wibowo MC, Yang Z, Borry M, Hübner A, Huang KD, Tierney BT, Zimmerman S, Barajas-Olmos F, Contreras-Cubas C, García-Ortiz H, Martínez-Hernández A, Luber JM, Kirstahler P, Blohm T, Smiley FE, Arnold R, Ballal SA, Pamp SJ, Russ J, Maixner F, Rota-Stabelli O, Segata N, Reinhard K, Orozco L, Warinner C, Snow M, LeBlanc S, Kostic AD. Reconstruction of ancient microbial genomes from the human gut. Nature. 2021 Jun; 594(7862):234-239. PMID: 33981035.
      Citations: 1     Fields:    
    3. Taylor WTT, Pruvost M, Posth C, Rendu W, Krajcarz MT, Abdykanova A, Brancaleoni G, Spengler R, Hermes T, Schiavinato S, Hodgins G, Stahl R, Min J, Alisher Kyzy S, Fedorowicz S, Orlando L, Douka K, Krivoshapkin A, Jeong C, Warinner C, Shnaider S. Evidence for early dispersal of domestic sheep into Central Asia. Nat Hum Behav. 2021 Apr 08. PMID: 33833423.
      Citations:    Fields:    
    4. Rampelli S, Turroni S, Mallol C, Hernandez C, Galván B, Sistiaga A, Biagi E, Astolfi A, Brigidi P, Benazzi S, Lewis CM, Warinner C, Hofman CA, Schnorr SL, Candela M. Components of a Neanderthal gut microbiome recovered from fecal sediments from El Salt. Commun Biol. 2021 Feb 05; 4(1):169. PMID: 33547403.
    5. Fellows Yates JA, Andrades Valtueña A, Vågene ÅJ, Cribdon B, Velsko IM, Borry M, Bravo-Lopez MJ, Fernandez-Guerra A, Green EJ, Ramachandran SL, Heintzman PD, Spyrou MA, Hübner A, Gancz AS, Hider J, Allshouse AF, Zaro V, Warinner C. Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir. Sci Data. 2021 01 26; 8(1):31. PMID: 33500403.
      Citations:    Fields:    Translation:Humans
    6. Scott A, Power RC, Altmann-Wendling V, Artzy M, Martin MAS, Eisenmann S, Hagan R, Salazar-García DC, Salmon Y, Yegorov D, Milevski I, Finkelstein I, Stockhammer PW, Warinner C. Exotic foods reveal contact between South Asia and the Near East during the second millennium BCE. Proc Natl Acad Sci U S A. 2021 01 12; 118(2). PMID: 33419922.
      Citations: 1     Fields:    Translation:Humans
    7. Nielsen RL, Helenius M, Garcia SL, Roager HM, Aytan-Aktug D, Hansen LBS, Lind MV, Vogt JK, Dalgaard MD, Bahl MI, Jensen CB, Muktupavela R, Warinner C, Aaskov V, Gøbel R, Kristensen M, Frøkiær H, Sparholt MH, Christensen AF, Vestergaard H, Hansen T, Kristiansen K, Brix S, Petersen TN, Lauritzen L, Licht TR, Pedersen O, Gupta R. Data integration for prediction of weight loss in randomized controlled dietary trials. Sci Rep. 2020 11 18; 10(1):20103. PMID: 33208769.
      Citations:    Fields:    Translation:Humans
    8. Jeong C, Wang K, Wilkin S, Taylor WTT, Miller BK, Bemmann JH, Stahl R, Chiovelli C, Knolle F, Ulziibayar S, Khatanbaatar D, Erdenebaatar D, Erdenebat U, Ochir A, Ankhsanaa G, Vanchigdash C, Ochir B, Munkhbayar C, Tumen D, Kovalev A, Kradin N, Bazarov BA, Miyagashev DA, Konovalov PB, Zhambaltarova E, Miller AV, Haak W, Schiffels S, Krause J, Boivin N, Erdene M, Hendy J, Warinner C. A Dynamic 6,000-Year Genetic History of Eurasia's Eastern Steppe. Cell. 2020 11 12; 183(4):890-904.e29. PMID: 33157037.
      Citations: 5     Fields:    Translation:Humans
    9. Skourtanioti E, Erdal YS, Frangipane M, Balossi Restelli F, Yener KA, Pinnock F, Matthiae P, Özbal R, Schoop UD, Guliyev F, Akhundov T, Lyonnet B, Hammer EL, Nugent SE, Burri M, Neumann GU, Penske S, Ingman T, Akar M, Shafiq R, Palumbi G, Eisenmann S, D'Andrea M, Rohrlach AB, Warinner C, Jeong C, Stockhammer PW, Haak W, Krause J. Genomic History of Neolithic to Bronze Age Anatolia, Northern Levant, and Southern Caucasus. Cell. 2020 05 28; 181(5):1158-1175.e28. PMID: 32470401.
      Citations: 3     Fields:    Translation:Humans
    10. Borry M, Cordova B, Perri A, Wibowo M, Prasad Honap T, Ko J, Yu J, Britton K, Girdland-Flink L, Power RC, Stuijts I, Salazar-García DC, Hofman C, Hagan R, Samdapawindé Kagoné T, Meda N, Carabin H, Jacobson D, Reinhard K, Lewis C, Kostic A, Jeong C, Herbig A, Hübner A, Warinner C. CoproID predicts the source of coprolites and paleofeces using microbiome composition and host DNA content. PeerJ. 2020; 8:e9001. PMID: 32337106.
    11. Wilkin S, Ventresca Miller A, Taylor WTT, Miller BK, Hagan RW, Bleasdale M, Scott A, Gankhuyg S, Ramsøe A, Uliziibayar S, Trachsel C, Nanni P, Grossmann J, Orlando L, Horton M, Stockhammer PW, Myagmar E, Boivin N, Warinner C, Hendy J. Dairy pastoralism sustained eastern Eurasian steppe populations for 5,000 years. Nat Ecol Evol. 2020 03; 4(3):346-355. PMID: 32127685.
      Citations: 8     Fields:    Translation:HumansAnimals
    12. Honap TP, Sankaranarayanan K, Schnorr SL, Ozga AT, Warinner C, Lewis CM. Biogeographic study of human gut-associated crAssphage suggests impacts from industrialization and recent expansion. PLoS One. 2020; 15(1):e0226930. PMID: 31940321.
      Citations: 2     Fields:    Translation:HumansCells
    13. Hübler R, Key FM, Warinner C, Bos KI, Krause J, Herbig A. HOPS: automated detection and authentication of pathogen DNA in archaeological remains. Genome Biol. 2019 12 16; 20(1):280. PMID: 31842945.
      Citations: 12     Fields:    
    14. Hagan RW, Hofman CA, Hübner A, Reinhard K, Schnorr S, Lewis CM, Sankaranarayanan K, Warinner CG. Comparison of extraction methods for recovering ancient microbial DNA from paleofeces. Am J Phys Anthropol. 2020 02; 171(2):275-284. PMID: 31785113.
      Citations: 6     Fields:    Translation:Animals
    15. Aronsen GP, Fehren-Schmitz L, Krigbaum J, Kamenov GD, Conlogue GJ, Warinner C, Ozga AT, Sankaranarayanan K, Griego A, DeLuca DW, Eckels HT, Byczkiewicz RK, Grgurich T, Pelletier NA, Brownlee SA, Marichal A, Williamson K, Tonoike Y, Bellantoni NF. "The dead shall be raised": Multidisciplinary analysis of human skeletons reveals complexity in 19th century immigrant socioeconomic history and identity in New Haven, Connecticut. PLoS One. 2019; 14(9):e0219279. PMID: 31498793.
      Citations:    Fields:    Translation:Humans
    16. Geber J, Tromp M, Scott A, Bouwman A, Nanni P, Grossmann J, Hendy J, Warinner C. Relief food subsistence revealed by microparticle and proteomic analyses of dental calculus from victims of the Great Irish Famine. Proc Natl Acad Sci U S A. 2019 09 24; 116(39):19380-19385. PMID: 31501337.
      Citations: 1     Fields:    Translation:Humans
    17. Hernández-Hernández O, Hernández-Zaragoza DI, Barquera R, Warinner C, López-Gil C, Arrieta-Bolaños E, Clayton S, Bravo-Acevedo A, Ramos-de la Cruz FDR, Méndez-Mani P, Pavón-Vargas MLÁ, Zúñiga J, Yunis EJ, Bekker-Méndez C, Granados J. Genetic diversity of HLA system in two populations from Oaxaca, Mexico: Oaxaca city and rural Oaxaca. Hum Immunol. 2020 Sep; 81(9):553-556. PMID: 31345697.
      Citations:    Fields:    
    18. Velsko IM, Fellows Yates JA, Aron F, Hagan RW, Frantz LAF, Loe L, Martinez JBR, Chaves E, Gosden C, Larson G, Warinner C. Microbial differences between dental plaque and historic dental calculus are related to oral biofilm maturation stage. Microbiome. 2019 07 06; 7(1):102. PMID: 31279340.
      Citations: 17     Fields:    Translation:HumansCells
    19. Radini A, Tromp M, Beach A, Tong E, Speller C, McCormick M, Dudgeon JV, Collins MJ, Rühli F, Kröger R, Warinner C. Medieval women's early involvement in manuscript production suggested by lapis lazuli identification in dental calculus. Sci Adv. 2019 01; 5(1):eaau7126. PMID: 30662947.
      Citations: 2     Fields:    Translation:Humans
    20. Ziesemer KA, Ramos-Madrigal J, Mann AE, Brandt BW, Sankaranarayanan K, Ozga AT, Hoogland M, Hofman CA, Salazar-García DC, Frohlich B, Milner GR, Stone AC, Aldenderfer M, Lewis CM, Hofman CL, Warinner C, Schroeder H. The efficacy of whole human genome capture on ancient dental calculus and dentin. Am J Phys Anthropol. 2019 03; 168(3):496-509. PMID: 30586168.
      Citations: 5     Fields:    Translation:Humans
    21. Lindo J, Haas R, Hofman C, Apata M, Moraga M, Verdugo RA, Watson JT, Viviano Llave C, Witonsky D, Beall C, Warinner C, Novembre J, Aldenderfer M, Di Rienzo A. The genetic prehistory of the Andean highlands 7000 years BP though European contact. Sci Adv. 2018 11; 4(11):eaau4921. PMID: 30417096.
      Citations: 15     Fields:    Translation:Humans
    22. Jeong C, Wilkin S, Amgalantugs T, Bouwman AS, Taylor WTT, Hagan RW, Bromage S, Tsolmon S, Trachsel C, Grossmann J, Littleton J, Makarewicz CA, Krigbaum J, Burri M, Scott A, Davaasambuu G, Wright J, Irmer F, Myagmar E, Boivin N, Robbeets M, Rühli FJ, Krause J, Frohlich B, Hendy J, Warinner C. Bronze Age population dynamics and the rise of dairy pastoralism on the eastern Eurasian steppe. Proc Natl Acad Sci U S A. 2018 11 27; 115(48):E11248-E11255. PMID: 30397125.
      Citations: 19     Fields:    Translation:HumansAnimals
    23. Hendy J, Warinner C, Bouwman A, Collins MJ, Fiddyment S, Fischer R, Hagan R, Hofman CA, Holst M, Chaves E, Klaus L, Larson G, Mackie M, McGrath K, Mundorff AZ, Radini A, Rao H, Trachsel C, Velsko IM, Speller CF. Proteomic evidence of dietary sources in ancient dental calculus. Proc Biol Sci. 2018 07 18; 285(1883). PMID: 30051838.
      Citations: 15     Fields:    
    24. Velsko IM, Frantz LAF, Herbig A, Larson G, Warinner C. Selection of Appropriate Metagenome Taxonomic Classifiers for Ancient Microbiome Research. mSystems. 2018 Jul-Aug; 3(4). PMID: 30035235.
    25. Hendy J, Welker F, Demarchi B, Speller C, Warinner C, Collins MJ. Author Correction: A guide to ancient protein studies. Nat Ecol Evol. 2018 07; 2(7):1190. PMID: 29867101.
      Citations:    Fields:    
    26. Mann AE, Sabin S, Ziesemer K, Vågene ÅJ, Schroeder H, Ozga AT, Sankaranarayanan K, Hofman CA, Fellows Yates JA, Salazar-García DC, Frohlich B, Aldenderfer M, Hoogland M, Read C, Milner GR, Stone AC, Lewis CM, Krause J, Hofman C, Bos KI, Warinner C. Differential preservation of endogenous human and microbial DNA in dental calculus and dentin. Sci Rep. 2018 06 29; 8(1):9822. PMID: 29959351.
      Citations: 20     Fields:    Translation:HumansCells
    27. Hendy J, Welker F, Demarchi B, Speller C, Warinner C, Collins MJ. A guide to ancient protein studies. Nat Ecol Evol. 2018 05; 2(5):791-799. PMID: 29581591.
      Citations: 22     Fields:    
    28. Vågene ÅJ, Herbig A, Campana MG, Robles García NM, Warinner C, Sabin S, Spyrou MA, Andrades Valtueña A, Huson D, Tuross N, Bos KI, Krause J. Salmonella enterica genomes from victims of a major sixteenth-century epidemic in Mexico. Nat Ecol Evol. 2018 03; 2(3):520-528. PMID: 29335577.
      Citations: 50     Fields:    Translation:HumansCellsPHPublic Health
    29. Morales-Arce AY, Hofman CA, Duggan AT, Benfer AK, Katzenberg MA, McCafferty G, Warinner C. Successful reconstruction of whole mitochondrial genomes from ancient Central America and Mexico. Sci Rep. 2017 12 22; 7(1):18100. PMID: 29273718.
      Citations: 2     Fields:    Translation:Humans
    30. Velsko IM, Overmyer KA, Speller C, Klaus L, Collins MJ, Loe L, Frantz LAF, Sankaranarayanan K, Lewis CM, Martinez JBR, Chaves E, Coon JJ, Larson G, Warinner C. The dental calculus metabolome in modern and historic samples. Metabolomics. 2017; 13(11):134. PMID: 29046620.
      Citations: 7     Fields:    
    31. Warinner C, Herbig A, Mann A, Fellows Yates JA, Weiß CL, Burbano HA, Orlando L, Krause J. A Robust Framework for Microbial Archaeology. Annu Rev Genomics Hum Genet. 2017 08 31; 18:321-356. PMID: 28460196.
      Citations: 31     Fields:    Translation:HumansCells
    32. Bouwman A, Shved N, Akgül G, Rühli F, Warinner C. Ancient DNA Investigation of a Medieval German Cemetery Confirms Long-Term Stability of CCR5-?32 Allele Frequencies in Central Europe. Hum Biol. 2017 04; 89(2):119-124. PMID: 29299966.
      Citations:    Fields:    Translation:HumansPHPublic Health
    33. Schnorr SL, Sankaranarayanan K, Lewis CM, Warinner C. Insights into human evolution from ancient and contemporary microbiome studies. Curr Opin Genet Dev. 2016 Dec; 41:14-26. PMID: 27507098.
      Citations: 11     Fields:    Translation:HumansAnimals
    34. Warinner C. Dental Calculus and the Evolution of the Human Oral Microbiome. J Calif Dent Assoc. 2016 Jul; 44(7):411-20. PMID: 27514153.
      Citations: 5     Fields:    Translation:Humans
    35. Ozga AT, Sankaranarayanan K, Tito RY, Obregon-Tito AJ, Foster MW, Tallbull G, Spicer P, Warinner CG, Lewis CM. Oral microbiome diversity among Cheyenne and Arapaho individuals from Oklahoma. Am J Phys Anthropol. 2016 10; 161(2):321-7. PMID: 27357925.
      Citations: 6     Fields:    Translation:HumansCells
    36. Jeong C, Ozga AT, Witonsky DB, Malmström H, Edlund H, Hofman CA, Hagan RW, Jakobsson M, Lewis CM, Aldenderfer MS, Di Rienzo A, Warinner C. Long-term genetic stability and a high-altitude East Asian origin for the peoples of the high valleys of the Himalayan arc. Proc Natl Acad Sci U S A. 2016 07 05; 113(27):7485-90. PMID: 27325755.
      Citations: 31     Fields:    Translation:Humans
    37. Ziesemer KA, Mann AE, Sankaranarayanan K, Schroeder H, Ozga AT, Brandt BW, Zaura E, Waters-Rist A, Hoogland M, Salazar-García DC, Aldenderfer M, Speller C, Hendy J, Weston DA, MacDonald SJ, Thomas GH, Collins MJ, Lewis CM, Hofman C, Warinner C. Corrigendum: Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification. Sci Rep. 2016 06 02; 6:27163. PMID: 27254246.
      Citations:    Fields:    
    38. Ozga AT, Nieves-Colón MA, Honap TP, Sankaranarayanan K, Hofman CA, Milner GR, Lewis CM, Stone AC, Warinner C. Successful enrichment and recovery of whole mitochondrial genomes from ancient human dental calculus. Am J Phys Anthropol. 2016 06; 160(2):220-8. PMID: 26989998.
      Citations: 18     Fields:    Translation:Humans
    39. Sankaranarayanan K, Ozga AT, Warinner C, Tito RY, Obregon-Tito AJ, Xu J, Gaffney PM, Jervis LL, Cox D, Stephens L, Foster M, Tallbull G, Spicer P, Lewis CM. Gut Microbiome Diversity among Cheyenne and Arapaho Individuals from Western Oklahoma. Curr Biol. 2015 Dec 21; 25(24):3161-9. PMID: 26671671.
      Citations: 17     Fields:    Translation:Humans
    40. Ziesemer KA, Mann AE, Sankaranarayanan K, Schroeder H, Ozga AT, Brandt BW, Zaura E, Waters-Rist A, Hoogland M, Salazar-García DC, Aldenderfer M, Speller C, Hendy J, Weston DA, MacDonald SJ, Thomas GH, Collins MJ, Lewis CM, Hofman C, Warinner C. Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification. Sci Rep. 2015 11 13; 5:16498. PMID: 26563586.
      Citations: 36     Fields:    Translation:HumansCells
    41. Obregon-Tito AJ, Tito RY, Metcalf J, Sankaranarayanan K, Clemente JC, Ursell LK, Zech Xu Z, Van Treuren W, Knight R, Gaffney PM, Spicer P, Lawson P, Marin-Reyes L, Trujillo-Villarroel O, Foster M, Guija-Poma E, Troncoso-Corzo L, Warinner C, Ozga AT, Lewis CM. Subsistence strategies in traditional societies distinguish gut microbiomes. Nat Commun. 2015 Mar 25; 6:6505. PMID: 25807110.
      Citations: 129     Fields:    Translation:HumansCells
    42. Warinner C, Speller C, Collins MJ. A new era in palaeomicrobiology: prospects for ancient dental calculus as a long-term record of the human oral microbiome. Philos Trans R Soc Lond B Biol Sci. 2015 Jan 19; 370(1660):20130376. PMID: 25487328.
      Citations: 41     Fields:    Translation:Humans
    43. Warinner C, Speller C, Collins MJ, Lewis CM. Ancient human microbiomes. J Hum Evol. 2015 Feb; 79:125-36. PMID: 25559298.
      Citations: 26     Fields:    Translation:Humans
    44. Warinner C, Hendy J, Speller C, Cappellini E, Fischer R, Trachsel C, Arneborg J, Lynnerup N, Craig OE, Swallow DM, Fotakis A, Christensen RJ, Olsen JV, Liebert A, Montalva N, Fiddyment S, Charlton S, Mackie M, Canci A, Bouwman A, Rühli F, Gilbert MT, Collins MJ. Direct evidence of milk consumption from ancient human dental calculus. Sci Rep. 2014 Nov 27; 4:7104. PMID: 25429530.
      Citations: 34     Fields:    Translation:HumansAnimals
    45. Shved N, Haas C, Papageorgopoulou C, Akguel G, Paulsen K, Bouwman A, Warinner C, Rühli F. Post mortem DNA degradation of human tissue experimentally mummified in salt. PLoS One. 2014; 9(10):e110753. PMID: 25337822.
      Citations: 4     Fields:    Translation:Humans
    46. Warinner C, Rodrigues JF, Vyas R, Trachsel C, Shved N, Grossmann J, Radini A, Hancock Y, Tito RY, Fiddyment S, Speller C, Hendy J, Charlton S, Luder HU, Salazar-García DC, Eppler E, Seiler R, Hansen LH, Castruita JA, Barkow-Oesterreicher S, Teoh KY, Kelstrup CD, Olsen JV, Nanni P, Kawai T, Willerslev E, von Mering C, Lewis CM, Collins MJ, Gilbert MT, Rühli F, Cappellini E. Pathogens and host immunity in the ancient human oral cavity. Nat Genet. 2014 Apr; 46(4):336-44. PMID: 24562188.
      Citations: 128     Fields:    Translation:HumansCells
    47. Krüttli A, Bouwman A, Akgül G, Della Casa P, Rühli F, Warinner C. Ancient DNA analysis reveals high frequency of European lactase persistence allele (T-13910) in medieval central europe. PLoS One. 2014; 9(1):e86251. PMID: 24465990.
      Citations: 14     Fields:    Translation:HumansAnimals
    48. Warinner C, Tuross N. Brief communication: tissue isotopic enrichment associated with growth depression in a pig: implications for archaeology and ecology. Am J Phys Anthropol. 2010 Mar; 141(3):486-93. PMID: 20052664.
      Citations: 4     Fields:    Translation:Animals
    49. Tuross N, Warinner C, Kirsanow K, Kester C. Organic oxygen and hydrogen isotopes in a porcine controlled dietary study. Rapid Commun Mass Spectrom. 2008 Jun; 22(11):1741-5. PMID: 18446769.
      Citations: 5     Fields:    Translation:Animals
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